BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030F06LP1|AL429252
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1731 1751 0.0
>3x_Contig1731
Length = 24233
Score = 1751 bits (882), Expect = 0.0
Identities = 905/910 (99%), Gaps = 3/910 (0%)
Strand = Plus / Plus
Query: 1 gctggtaaggtcgtcaagaaggagtcttcaaagaagaccactgctaagaaagcagctacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21174 gctggtaaggtcgtcaagaaggagtcttcaaagaagaccactgctaagaaagcagctacc 21233
Query: 61 aagaaggctcctgctaagaagactgccgttaagaagtccaagaaataaagttaatcaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21234 aagaaggctcctgctaagaagactgccgttaagaagtccaagaaataaagttaatcaaat 21293
Query: 121 ttcgaatcactttatttttttacctcctgtgaatatcgattcacctaacttcttaatgcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21294 ttcgaatcactttatttttttacctcctgtgaatatcgattcacctaacttcttaatgcg 21353
Query: 181 tgtgttgtattttactaccttcctttgatacttctgtctacccttaataattcagttcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21354 tgtgttgtattttactaccttcctttgatacttctgtctacccttaataattcagttcaa 21413
Query: 241 atcggttatttttgtgttatttaaatcaattataccctttatcaccactctattattttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21414 atcggttatttttgtgttatttaaatcaattataccctttatcaccactctattattttc 21473
Query: 301 ttccttgaaaaattgtctttctgttgaaatatattccaccccttcctgtcctttacccta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21474 ttccttgaaaaattgtctttctgttgaaatatattccaccccttcctgtcctttacccta 21533
Query: 361 cttattccttttgactacattcaccatcatttattccaacccaaacctcctatctcttac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21534 cttattccttttgactacattcaccatcatttattccaacccaaacctcctatctcttac 21593
Query: 421 tgtggtctctctgttactcctcctttcatcttttcttttaactcacggaaattttaaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21594 tgtggtctctctgttactcctcctttcatcttttcttttaactcacggaaattttaaaat 21653
Query: 481 gagaacacaccacttagattattgactagtgtaatattaacattagcggatttctaaatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21654 gagaacacaccacttagattattgactagtgtaatattaacattagcggatttctaaatc 21713
Query: 541 aatccgctcttctttattgatatctcgaataaaatcattaaaaatttcaaatcaacaggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21714 aatccgctcttctttattgatatctcgaataaaatcattaaaaatttcaaatcaacaggt 21773
Query: 601 agataccacctacctttatcgtacatgtttcctatccattgctgacaataaactgtcaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21774 agataccacctacctttatcgtacatgtttcctatccattgctgacaataaactgtcaga 21833
Query: 661 atctgtcttttttacctatcatttaattacraattgtatcttattattattagcttgatg 720
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 21834 atctgtcttttttacctatcatttaattacaaattgtatcttattattattagcttgatg 21893
Query: 721 atgccgaatggaagcaactattgattgagaaaatgccatcattttttacttctgaagaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21894 atgccgaatggaagcaactattgattgagaaaatgccatcattttttacttctgaagaga 21953
Query: 781 atgcaagagatcataaatatacctatagtactattatgtaaatgtatcattactgattat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21954 atgcaagagatcataaatatacctatagtactattatgtaaatgtatcattactgattat 22013
Query: 841 atcatttgatattgcttggttgcataattggttg-aaactgacgccgg-tcacgtga-ct 897
|||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||
Sbjct: 22014 atcatttgatattgcttggttgcataattggttgaaaactgacgccggttcacgtgacct 22073
Query: 898 gtcgtatytc 907
||||||| ||
Sbjct: 22074 gtcgtatctc 22083
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9147
Number of Sequences: 1807
Number of extensions: 9147
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)